MDLJ_Simulation Member List

This is the complete list of members for MDLJ_Simulation, including all inherited members.

adjustPosCenMass(Cluster &cluster) const	MDLJ_Simulation	[protected]
BaseSimulation(const ConfigurationDatabase &conf)	BaseSimulation
calculateAccelerations(Cluster &cluster) const	MDLJ_Simulation	[protected]
calculatePositions(Cluster &cluster) const	MDLJ_Simulation	[protected]
calculateVelocities(Cluster &cluster) const	MDLJ_Simulation	[protected]
changeInStep() const	BaseSimulation
clear()	MDLJ_Simulation
findLastStep(string baseName) const	MDLJ_Simulation	[protected, virtual]
m_accumEnergySQ	MD_Simulation	[protected]
m_accumEnergyTotal	MD_Simulation	[protected]
m_accumKineticSQ	MD_Simulation	[protected]
m_accumKineticTotal	MD_Simulation	[protected]
m_accumPotentialSQ	MD_Simulation	[protected]
m_accumPotentialTotal	MD_Simulation	[protected]
m_changeInStep	BaseSimulation	[protected]
m_kineticEnergyHistogram	BaseSimulation	[protected]
m_potentialEnergyHistogram	BaseSimulation	[protected]
m_printInterval	BaseSimulation	[protected]
m_radialDensityHistogram	BaseSimulation	[protected]
m_radialDistributionFunction	BaseSimulation	[protected]
m_reducedEnergyTotal	MDLJ_Simulation	[private]
m_reducedKineticEnergy	MDLJ_Simulation	[private]
m_reducedPotentialEnergy	MDLJ_Simulation	[private]
m_runSteps	BaseSimulation	[protected]
m_stepStart	BaseSimulation	[protected]
m_temperature	MD_Simulation	[protected]
m_timeStep	MD_Simulation	[protected]
MD_Simulation(const ConfigurationDatabase &conf)	MD_Simulation
MDLJ_Simulation(const ConfigurationDatabase &conf)	MDLJ_Simulation
printInterval() const	BaseSimulation
reducedKineticEnergy() const	MDLJ_Simulation
reducedPotentialEnergy() const	MDLJ_Simulation
reducedTotalEnergy() const	MDLJ_Simulation
run(Cluster &cluster, string currentRun, string prevRun)	MDLJ_Simulation	[virtual]
runSteps() const	BaseSimulation
setChangeInStep(double change)	BaseSimulation
setPrintInterval(int interval)	BaseSimulation
setRunSteps(int steps)	BaseSimulation
writeAverages(ostream &out, const Cluster &cluster)	MD_Simulation	[protected]

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